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Intron Name: Anas_platyrhynchos_platyrhynchos_9_7674970_7715599_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7674970 - 7715599

Intron Length:

40630

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACG|GTAAGTGCT

5'SS Class:

strong_major

3'SS Sequence:

TCCTTTCATACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTTTCAT

U12 Branch Point Sequence:

CTTCCTTTCATA

Flanking Amino Acid:

QLNGPQLSATVDKVCGQPKQ

Intron Amino Acid Position:

285

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.2

0.88

0.9

79.2

34.7

Major BPS

87.6

0.93

0.9

89.3

Major PPT

81.1

0.7

0.8

76.3

31.4

Minor 5ss

35.8

-1.6

3.3

51.5

44.9

Minor BPS

56.5

0.2

1.7

68.01

39.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000000805

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020834

7570459 - 7947259

376801

ENSAPLT00000000780

7586512 - 7722111

135600

ENSAPLT00000044431

7586512 - 7781406

194895

ENSAPLT00000036712

7586512 - 7947116

360605

ENSAPLT00000036119

7586512 - 7947259

360748