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Intron Name: Anas_platyrhynchos_platyrhynchos_9_7720123_7721981_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7720123 - 7721981

Intron Length:

1859

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCG|GTAAGAATG

5'SS Class:

strong_major

3'SS Sequence:

TCCTACGTTGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGTTAAA

U12 Branch Point Sequence:

TTGTTGTTAAAT

Flanking Amino Acid:

DKSRSLKKISREFINYMKRS

Intron Amino Acid Position:

401

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.3

0.79

75.8

Major BPS

75.2

0.63

1.1

75.9

36.3

Major PPT

75.3

0.57

0.9

68.6

36.9

Minor 5ss

37.6

-1.4

3.1

50.5

45.5

Minor BPS

58.9

0.36

2.2

80.5

41.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000000805

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036712

7586512 - 7947116

360605

ENSAPLT00000036119

7586512 - 7947259

360748

ENSAPLT00000044431

7586512 - 7781406

194895