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Intron Name: Anas_platyrhynchos_platyrhynchos_9_7802244_7852915_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7802244 - 7852915

Intron Length:

50672

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTAAGTAAC

5'SS Class:

strong_major

3'SS Sequence:

TTTTCCTTTTTAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTGAC

U12 Branch Point Sequence:

TTTTCCTTTTTA

Flanking Amino Acid:

LIDKLQHFNQLDAEKAKLKL

Intron Amino Acid Position:

435

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.2

0.88

0.9

84.2

26.3

Major BPS

81.4

0.78

0.9

71.3

36.7

Major PPT

89.8

0.9

0.6

89.2

19.6

Minor 5ss

37.7

-1.4

2.7

46.1

36.1

Minor BPS

47.4

-0.2

3.6

79.05

37.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000000805

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036712

7586512 - 7947116

360605

ENSAPLT00000036119

7586512 - 7947259

360748

ENSAPLT00000020834

7570459 - 7947259

376801