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Intron Name: Anas_platyrhynchos_platyrhynchos_9_8245689_8249015_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8245689 - 8249015

Intron Length:

3327

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTAAGAAGG

5'SS Class:

strong_major

3'SS Sequence:

CTTATTCCACTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTCTTAT

U12 Branch Point Sequence:

TCTGTCTTATTC

Flanking Amino Acid:

DLNTEWKYLMDSLVVVADRI

Intron Amino Acid Position:

660

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.2

0.71

66.4

45.1

Major BPS

73.7

0.59

1.2

65.7

43.2

Major PPT

70.1

0.45

0.9

63.8

37.9

Minor 5ss

32.4

-2

2.9

32.4

41.9

Minor BPS

55.8

0.16

1.7

64.92

41.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000006321

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000031615

8062224 - 8255837

193614

ENSAPLT00000006582

8045587 - 8253656

208070