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Intron Name: Anas_platyrhynchos_platyrhynchos_9_8251875_8252716_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8251875 - 8252716

Intron Length:

842

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATGGAGA

5'SS Class:

strong_major

3'SS Sequence:

CCTTCCTCCACAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATCTAAA

U12 Branch Point Sequence:

CCTTCCTCCACA

Flanking Amino Acid:

DKCWNGMTKGSYLPEVMGDG

Intron Amino Acid Position:

788

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.9

0.75

71.4

40.1

Major BPS

76.5

0.66

0.8

75.9

24.9

Major PPT

77.9

0.63

0.7

71.9

26.3

Minor 5ss

37.7

-1.4

3.1

48.6

47.2

Minor BPS

54.7

0.14

67.11

45.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000006321

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000031615

8062224 - 8255837

193614

ENSAPLT00000006582

8045587 - 8253656

208070