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Intron Name: Anas_platyrhynchos_platyrhynchos_9_8252893_8253438_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8252893 - 8253438

Intron Length:

546

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CGA|GTGAGTAGC

5'SS Class:

major

3'SS Sequence:

TGTCTCCCCGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GGCTCAC

U12 Branch Point Sequence:

CTGGGCTCACCC

Flanking Amino Acid:

IGNDVDFQDASDDMSGSGSG

Intron Amino Acid Position:

847

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.7

0.51

40.1

Major BPS

52.1

0.05

1.3

41.8

Major PPT

0.58

0.8

30.9

Minor 5ss

31.9

-2.1

2.7

33.3

35.4

Minor BPS

41.1

-0.7

2.2

49.56

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000006321

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000031615

8062224 - 8255837

193614

ENSAPLT00000006582

8045587 - 8253656

208070