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Intron Name: Anas_platyrhynchos_platyrhynchos_9_8258568_8262832_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

8258568 - 8262832

Intron Length:

4265

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

CGG|GCAAACCCC

5'SS Class:

major

3'SS Sequence:

CCAGCCAGGCAAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTCCAAT

U12 Branch Point Sequence:

TCGGCTTCCAAT

Flanking Amino Acid:

GKPVPPQAHRVTASLLISNA

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

66.1

0.38

1.3

60.9

41.9

Major BPS

71.8

0.54

1.2

32.5

Major PPT

44.6

-0.3

1.1

33.8

34.6

Minor 5ss

27.7

-2.6

34.5

41.4

Minor BPS

-0.5

2.1

56.49

46.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000006546

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041181

8258502 - 8267091

8590