Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_9_8300833_8307608_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8300833 - 8307608

Intron Length:

6776

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAACGGGC

5'SS Class:

major

3'SS Sequence:

AATCTCATTTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATCTCAT

U12 Branch Point Sequence:

TTTGTCTTGACA

Flanking Amino Acid:

PPAGGHTTSYRQEYRPWTGA

Intron Amino Acid Position:

157

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.4

0.58

1.2

64.8

41.3

Major BPS

86.1

0.9

0.7

85.7

22.9

Major PPT

75.5

0.57

0.9

71.2

38.6

Minor 5ss

35.1

-1.7

3.6

50.2

46.4

Minor BPS

74.3

0.76

1.3

81.71

33.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000021265

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000035186

8300361 - 8310038

9678