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Intron Name: Anas_platyrhynchos_platyrhynchos_9_8327561_8330808_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

8327561 - 8330808

Intron Length:

3248

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATTCTCC

5'SS Class:

weak_major

3'SS Sequence:

ATTTCCTCTCCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TTTTTTTTAATT

Flanking Amino Acid:

TPVTGKAAVSVIQSLSTSKV

Intron Amino Acid Position:

1002

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.7

0.49

1.1

61.3

38.4

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

83.2

0.75

0.8

74.4

35.8

Minor 5ss

54.5

0.15

2.3

69.1

41.6

Minor BPS

84.9

1.17

0.8

94.97

24.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000006672

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007000

8317772 - 8362741

44970