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Intron Name: Anas_platyrhynchos_platyrhynchos_9_8327926_8330808_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

8327926 - 8330808

Intron Length:

2883

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATTCTCC

5'SS Class:

weak_major

3'SS Sequence:

ATTCTTCTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TATTTAA

U12 Branch Point Sequence:

TTTTATTTAACA

Flanking Amino Acid:

TPVTGKAAVSGLLKIHSNQS

Intron Amino Acid Position:

1008

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.7

0.49

1.1

61.3

38.4

Major BPS

79.5

0.73

0.9

36.9

Major PPT

86.7

0.83

0.7

81.4

29.8

Minor 5ss

54.5

0.15

2.3

69.1

41.6

Minor BPS

80.2

0.94

1.3

88.36

28.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000006672

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000032404

8317255 - 8362741

45487

ENSAPLT00000030553

8317772 - 8362741

44970

ENSAPLT00000025225

8317255 - 8359759

42505

ENSAPLT00000047254

8317772 - 8362741

44970