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Intron Name: Anas_platyrhynchos_platyrhynchos_9_8332498_8333207_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8332498 - 8333207

Intron Length:

710

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAACTTGC

5'SS Class:

strong_major

3'SS Sequence:

TTTATTTTCCAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATTGAT

U12 Branch Point Sequence:

TATCGTTTATCC

Flanking Amino Acid:

TGQKTALFTQAAPGGQASLM

Intron Amino Acid Position:

878

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.4

0.74

1.1

73.2

39.3

Major BPS

88.6

0.96

0.8

77.7

37.1

Major PPT

75.7

0.58

75.3

38.6

Minor 5ss

46.1

-0.4

2.6

62.1

42.6

Minor BPS

49.4

-0

64.78

40.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000006672

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025225

8317255 - 8359759

42505

ENSAPLT00000007000

8317772 - 8362741

44970

ENSAPLT00000047254

8317772 - 8362741

44970

ENSAPLT00000032404

8317255 - 8362741

45487