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Intron Name: Anas_platyrhynchos_platyrhynchos_9_8337115_8338370_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8337115 - 8338370

Intron Length:

1256

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATGAGGC

5'SS Class:

strong_major

3'SS Sequence:

TTATTTGTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TACTTAT

U12 Branch Point Sequence:

CAATACTTATTT

Flanking Amino Acid:

STGEGTVQSKVVGVPVGSAL

Intron Amino Acid Position:

648

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.2

0.74

38.4

Major BPS

83.6

0.84

0.8

71.9

35.8

Major PPT

85.3

0.79

0.9

80.8

36.6

Minor 5ss

36.9

-1.5

3.3

50.4

46.2

Minor BPS

51.8

0.13

1.8

67.04

43.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000006672

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000032404

8317255 - 8362741

45487

ENSAPLT00000030553

8317772 - 8362741

44970

ENSAPLT00000025225

8317255 - 8359759

42505

ENSAPLT00000007000

8317772 - 8362741

44970

ENSAPLT00000047254

8317772 - 8362741

44970