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Intron Name: Anas_platyrhynchos_platyrhynchos_9_8338545_8339688_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

8338545 - 8339688

Intron Length:

1144

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATTCCTC

5'SS Class:

major

3'SS Sequence:

TCATATCTAAAAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TATTTAT

U12 Branch Point Sequence:

TTTTTCTTCATA

Flanking Amino Acid:

VTGGLGAFTKVIIKQEPGEL

Intron Amino Acid Position:

590

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.6

0.49

1.1

61.6

43.1

Major BPS

88.7

0.96

0.8

36.5

Major PPT

59.7

0.22

1.1

60.8

38.9

Minor 5ss

48.6

-0.1

2.7

68.3

42.7

Minor BPS

70.6

0.64

1.7

82.43

32.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000006672

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030553

8317772 - 8362741

44970

ENSAPLT00000025225

8317255 - 8359759

42505

ENSAPLT00000007000

8317772 - 8362741

44970

ENSAPLT00000047254

8317772 - 8362741

44970

ENSAPLT00000032404

8317255 - 8362741

45487