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Intron Name: Anas_platyrhynchos_platyrhynchos_9_8339797_8342446_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8339797 - 8342446

Intron Length:

2650

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAATGTTC

5'SS Class:

strong_major

3'SS Sequence:

TTCCTATTTGCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GTTTCAC

U12 Branch Point Sequence:

ATCTTCCTATTT

Flanking Amino Acid:

GSGFVTSAVKQEDSLFATMP

Intron Amino Acid Position:

554

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.2

0.73

75.8

34.6

Major BPS

72.3

0.55

1.2

77.4

37.4

Major PPT

85.7

0.8

0.7

80.7

30.1

Minor 5ss

41.4

-1

3.3

58.9

45.9

Minor BPS

49.5

0.04

1.9

70.25

41.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000006672

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030553

8317772 - 8362741

44970

ENSAPLT00000025225

8317255 - 8359759

42505

ENSAPLT00000007000

8317772 - 8362741

44970

ENSAPLT00000047254

8317772 - 8362741

44970

ENSAPLT00000032404

8317255 - 8362741

45487