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Intron Name: Anas_platyrhynchos_platyrhynchos_9_8399388_8404050_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8399388 - 8404050

Intron Length:

4663

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGGCAT

5'SS Class:

strong_major

3'SS Sequence:

TCTTTCTTTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CAGTAAA

U12 Branch Point Sequence:

GCTGCAGTAAAA

Flanking Amino Acid:

VVLAAASNYFRAMFCNDLRE

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.8

0.94

0.9

78.6

37.2

Major BPS

55.1

0.13

1.2

57.3

36.3

Major PPT

91.6

0.94

0.6

84.4

30.5

Minor 5ss

32.4

-2

3.4

46.7

48.6

Minor BPS

42.6

-0.5

2.3

54.32

43.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000007168

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007465

8399128 - 8415879

16752