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Intron Name: Anas_platyrhynchos_platyrhynchos_9_8584674_8588539_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8584674 - 8588539

Intron Length:

3866

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGTTGT

5'SS Class:

strong_major

3'SS Sequence:

GTTTGTAAAACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGTAAA

U12 Branch Point Sequence:

TGTTTGTAAAAC

Flanking Amino Acid:

SSISDILRDEESKQQCQTPP

Intron Amino Acid Position:

1513

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

92.2

0.99

0.7

83.9

30.3

Major BPS

75.2

0.63

1.1

75.9

36.3

Major PPT

0.34

1.1

59.9

44.1

Minor 5ss

36.5

-1.5

2.9

49.7

46.6

Minor BPS

46.4

-0.2

2.3

63.65

41.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000031224

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025742

8488025 - 8694625

206601

ENSAPLT00000046893

8533295 - 8693441

160147

ENSAPLT00000018945

8486306 - 8693441

207136

ENSAPLT00000036066

8486306 - 8693441

207136

ENSAPLT00000031919

8570689 - 8693441

122753

ENSAPLT00000031390

8488025 - 8693441

205417