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Intron Name: Anas_platyrhynchos_platyrhynchos_9_8588873_8594542_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8588873 - 8594542

Intron Length:

5670

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTAAGAAAC

5'SS Class:

strong_major

3'SS Sequence:

TTTCTATCTCTAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GTTTAAT

U12 Branch Point Sequence:

TGTTTTCTATCT

Flanking Amino Acid:

LQHLPEDQLKLQAGMSASIT

Intron Amino Acid Position:

1624

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.2

0.76

0.9

77.9

29.9

Major BPS

81.8

0.79

1.1

34.5

Major PPT

81.8

0.72

0.7

74.7

35.2

Minor 5ss

35.5

-1.6

44.2

37.3

Minor BPS

0.17

1.9

76.81

39.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000031224

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025742

8488025 - 8694625

206601

ENSAPLT00000046893

8533295 - 8693441

160147

ENSAPLT00000018945

8486306 - 8693441

207136

ENSAPLT00000036066

8486306 - 8693441

207136

ENSAPLT00000031919

8570689 - 8693441

122753

ENSAPLT00000031390

8488025 - 8693441

205417