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Intron Name: Anas_platyrhynchos_platyrhynchos_9_8682594_8685336_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8682594 - 8685336

Intron Length:

2743

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CGG|GTAAGAGCT

5'SS Class:

strong_major

3'SS Sequence:

GTGTGTGGTACAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTTAC

U12 Branch Point Sequence:

CTTACTACAAAC

Flanking Amino Acid:

EGWFPASFVRLRVNQDEPME

Intron Amino Acid Position:

226

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.9

0.75

72.5

37.3

Major BPS

81.5

0.78

0.9

71.6

36.1

Major PPT

0.32

1.1

56.8

47.6

Minor 5ss

32.6

-2

3.4

40.6

45.1

Minor BPS

45.1

-0.3

1.9

57.73

40.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000031224

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007618

8601215 - 8693441

92227

ENSAPLT00000031919

8570689 - 8693441

122753

ENSAPLT00000031390

8488025 - 8693441

205417

ENSAPLT00000046893

8533295 - 8693441

160147

ENSAPLT00000025742

8488025 - 8694625

206601

ENSAPLT00000036066

8486306 - 8693441

207136

ENSAPLT00000018945

8486306 - 8693441

207136

ENSAPLT00000034108

8488025 - 8693441

205417