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Intron Name: Anas_platyrhynchos_platyrhynchos_9_8685532_8686525_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8685532 - 8686525

Intron Length:

994

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAACGGAG

5'SS Class:

major

3'SS Sequence:

GGTTTCCTCCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCCAAT

U12 Branch Point Sequence:

AGCTTTCCAATG

Flanking Amino Acid:

YIKHLKDICEGYIKQCRKRA

Intron Amino Acid Position:

291

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.9

0.59

1.2

63.9

42.4

Major BPS

71.8

0.54

1.2

32.5

Major PPT

71.1

0.47

0.9

62.6

39.7

Minor 5ss

34.1

-1.8

3.6

45.9

49.3

Minor BPS

42.4

-0.7

1.7

42.65

36.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000031224

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000031390

8488025 - 8693441

205417

ENSAPLT00000046893

8533295 - 8693441

160147

ENSAPLT00000025742

8488025 - 8694625

206601

ENSAPLT00000036066

8486306 - 8693441

207136

ENSAPLT00000018945

8486306 - 8693441

207136

ENSAPLT00000034108

8488025 - 8693441

205417

ENSAPLT00000007618

8601215 - 8693441

92227

ENSAPLT00000031919

8570689 - 8693441

122753