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Intron Name: Anas_platyrhynchos_platyrhynchos_9_8686706_8687228_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8686706 - 8687228

Intron Length:

523

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAT|GTAAGTAAA

5'SS Class:

strong_major

3'SS Sequence:

ATTTCCTTTGCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTTTAAT

U12 Branch Point Sequence:

ATCCCTTTAATT

Flanking Amino Acid:

SEVGSCFLEYQTEFQIYSEY

Intron Amino Acid Position:

351

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.9

0.85

0.9

85.3

25.4

Major BPS

87.2

0.92

0.9

87.6

25.6

Major PPT

0.83

0.7

81.4

29.7

Minor 5ss

37.5

-1.4

2.8

46.9

41.8

Minor BPS

71.7

0.76

1.2

79.48

36.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000031224

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000031390

8488025 - 8693441

205417

ENSAPLT00000046893

8533295 - 8693441

160147

ENSAPLT00000025742

8488025 - 8694625

206601

ENSAPLT00000036066

8486306 - 8693441

207136

ENSAPLT00000018945

8486306 - 8693441

207136

ENSAPLT00000034108

8488025 - 8693441

205417

ENSAPLT00000007618

8601215 - 8693441

92227

ENSAPLT00000031919

8570689 - 8693441

122753