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Intron Name: Anas_platyrhynchos_platyrhynchos_9_8690676_8691304_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8690676 - 8691304

Intron Length:

629

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATGCAGA

5'SS Class:

strong_major

3'SS Sequence:

TTTTATTCTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTTTTAT

U12 Branch Point Sequence:

CTCTCTTTTATT

Flanking Amino Acid:

RRQVQLDQETGFSITEVQKK

Intron Amino Acid Position:

597

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.4

0.74

70.6

41.3

Major BPS

84.1

0.85

0.9

75.3

39.4

Major PPT

0.88

0.7

81.5

35.9

Minor 5ss

44.8

-0.6

2.6

57.7

46.6

Minor BPS

61.9

0.45

1.6

75.01

42.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000031224

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025742

8488025 - 8694625

206601

ENSAPLT00000036066

8486306 - 8693441

207136

ENSAPLT00000018945

8486306 - 8693441

207136

ENSAPLT00000034108

8488025 - 8693441

205417

ENSAPLT00000007618

8601215 - 8693441

92227

ENSAPLT00000031919

8570689 - 8693441

122753

ENSAPLT00000031390

8488025 - 8693441

205417

ENSAPLT00000046893

8533295 - 8693441

160147