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Intron Name: Anas_platyrhynchos_platyrhynchos_9_8709542_8710828_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8709542 - 8710828

Intron Length:

1287

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACGTGGA

5'SS Class:

strong_major

3'SS Sequence:

CTCTTCATCCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCTTCAT

U12 Branch Point Sequence:

TTCTCTTCATCC

Flanking Amino Acid:

VAGTTMAMSAGTLLTTHSPT

Intron Amino Acid Position:

159

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.1

0.83

72.6

39.1

Major BPS

87.4

0.93

0.9

87.9

29.5

Major PPT

73.3

0.52

0.8

66.1

34.5

Minor 5ss

-2.2

3.3

40.9

45.3

Minor BPS

56.8

0.19

1.8

70.17

41.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000007569

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000035507

8707214 - 8723176

15963

ENSAPLT00000007852

8707214 - 8726688

19475