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Intron Name: Anas_platyrhynchos_platyrhynchos_9_8712173_8723004_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8712173 - 8723004

Intron Length:

10832

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATGTGTA

5'SS Class:

strong_major

3'SS Sequence:

ACCTTTGTTTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTCAT

U12 Branch Point Sequence:

ATATTCTTAATG

Flanking Amino Acid:

YPGANPTFQTGYTPGTPYKV

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.4

0.93

0.8

83.2

28.6

Major BPS

100

1.24

0.5

100

Major PPT

79.2

0.66

0.9

76.4

37.1

Minor 5ss

42.4

-0.8

3.1

57.6

47.1

Minor BPS

0.58

1.2

70.25

37.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000007569

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000035507

8707214 - 8723176

15963

ENSAPLT00000007852

8707214 - 8726688

19475