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Intron Name: Anas_platyrhynchos_platyrhynchos_9_8784936_8785268_R

Intron Information:

Intron Rank:

137419

Intron Class:

major

Intron Phase:

Intron Coordinates:

8784936 - 8785268

Intron Length:

333

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGGGTGAC

5'SS Class:

strong_major

3'SS Sequence:

TCTCCTCCTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGCTAAC

U12 Branch Point Sequence:

CTGCTGCTAACC

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.6

0.75

0.9

71.9

33.8

Major BPS

69.4

0.48

1.1

69.6

35.5

Major PPT

82.8

0.74

0.7

77.1

24.8

Minor 5ss

26.1

-2.7

3.2

33.4

42.6

Minor BPS

43.7

-0.4

2.3

55.65

42.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000021423

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040391

8783718 - 8786707

2990