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Intron Name: Anas_platyrhynchos_platyrhynchos_9_8800612_8801107_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8800612 - 8801107

Intron Length:

496

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTAAGTCAG

5'SS Class:

strong_major

3'SS Sequence:

TGTTCCCTCTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCTACAA

U12 Branch Point Sequence:

TTTTCTACAAAG

Flanking Amino Acid:

FVESSQTSDSGRTVCECGYL

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.8

68.8

43.8

Major BPS

0.27

1.1

69.2

36.3

Major PPT

80.3

0.68

0.8

77.5

31.2

Minor 5ss

33.1

-1.9

2.8

41.8

Minor BPS

50.2

-0.1

66.15

41.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000007910

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008292

8799938 - 8816375

16438