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Intron Name: Anas_platyrhynchos_platyrhynchos_9_8811148_8811434_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8811148 - 8811434

Intron Length:

287

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTGAGTCTG

5'SS Class:

strong_major

3'SS Sequence:

GTTCTGTCCCCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATTTCAC

U12 Branch Point Sequence:

TTGCCCTCATTT

Flanking Amino Acid:

LLLNLLIAMFNYTFQQVQAH

Intron Amino Acid Position:

1056

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.3

0.71

0.9

71.6

40.2

Major BPS

81.3

0.78

0.8

83.4

26.1

Major PPT

74.3

0.55

0.9

65.4

41.1

Minor 5ss

34.1

-1.8

41.6

Minor BPS

53.8

0.2

1.8

73.76

43.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000007910

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008292

8799938 - 8816375

16438