Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_9_8814482_8814580_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8814482 - 8814580

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCT|GTGAGTGTC

5'SS Class:

major

3'SS Sequence:

TTCCTGCCCCCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCCTCAC

U12 Branch Point Sequence:

CACTGTCGAACT

Flanking Amino Acid:

KDTAVQDPFNLSLESLLKIN

Intron Amino Acid Position:

1296

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.4

0.51

1.1

69.1

35.8

Major BPS

60.1

0.25

1.1

62.9

34.3

Major PPT

0.54

0.8

65.4

36.2

Minor 5ss

34.7

-1.7

3.4

53.4

43.8

Minor BPS

42.8

-0.4

2.1

58.2

44.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000007910

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008292

8799938 - 8816375

16438