Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_9_8814683_8815012_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8814683 - 8815012

Intron Length:

330

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCT|GTGAGTGCA

5'SS Class:

major

3'SS Sequence:

TCTTTCCTACCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CCTCCAT

U12 Branch Point Sequence:

TCTTTCCTACCA

Flanking Amino Acid:

GLYAVQDGLPLNPMGRTGLR

Intron Amino Acid Position:

1330

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.47

1.1

64.5

35.3

Major BPS

52.4

0.06

1.3

41.7

Major PPT

80.8

0.69

0.8

74.5

Minor 5ss

30.4

-2.2

3.2

42.4

44.3

Minor BPS

54.9

0.15

71.21

41.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000007910

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008292

8799938 - 8816375

16438