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Intron Name: Anas_platyrhynchos_platyrhynchos_9_8819367_8819740_R


Intron Information:

Intron Rank:
11

Intron Class:
major

Intron Phase:
2

Intron Coordinates:
8819367 - 8819740

Intron Length:
374

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CAG|GTACTGCTG

5'SS Class:
major

3'SS Sequence:
CCTCCCCGTGCAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
CTTTTAG

U12 Branch Point Sequence:
CCGGAGCTAACT

Flanking Amino Acid:
FTFSVNSIIYRWQGYEGFVA

Intron Amino Acid Position:
563

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
68.5
0.44
1.1
57.3
47

Major BPS
60.2
0.25
1.6
61.1
45.5

Major PPT
71.2
0.48
0.9
64.9
30.6

Minor 5ss
33.4
-1.9
3.6
47.4
48

Minor BPS
38.7
-0.7
2.4
52.73
48

Associated Gene:

Gene:

Ensembl Gene ID:

Chromosome:
9

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

8819213 - 8825212
6000