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Intron Name: Anas_platyrhynchos_platyrhynchos_9_8820404_8820696_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8820404 - 8820696

Intron Length:

293

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAAGGTTA

5'SS Class:

strong_major

3'SS Sequence:

TCTTTCCCCTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATGTGAT

U12 Branch Point Sequence:

TCCTATGTGATG

Flanking Amino Acid:

GSFQLFQSILTFGAADWEVF

Intron Amino Acid Position:

467

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.1

0.8

0.9

77.5

33.3

Major BPS

72.4

0.56

1.2

63.1

44.4

Major PPT

83.2

0.75

0.7

81.4

23.7

Minor 5ss

40.5

-1.1

3.3

52.2

Minor BPS

42.2

-0.7

2.1

46.06

41.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000008783

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009142

8819213 - 8825212

6000