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Intron Name: Anas_platyrhynchos_platyrhynchos_9_8823280_8823319_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

8823280 - 8823319

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

CAA|GCAGGAGAA

5'SS Class:

major

3'SS Sequence:

CGCCCCCCCGGAG|A

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

GGTTCAA

U12 Branch Point Sequence:

TCTGGTTCAACG

Flanking Amino Acid:

VTLGSRPPCTKGLYLCDGST

Intron Amino Acid Position:

234

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.4

0.53

1.2

39.6

Major BPS

57.8

0.2

1.3

63.4

44.3

Major PPT

47.2

-0.1

1.6

49.8

Minor 5ss

19.7

-3.5

4.1

28.3

37.9

Minor BPS

46.5

-0.4

2.1

54.65

46.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000008783

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009142

8819213 - 8825212

6000