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Intron Name: Anas_platyrhynchos_platyrhynchos_9_8846873_8850952_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

8846873 - 8850952

Intron Length:

4080

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGTTTC

5'SS Class:

strong_major

3'SS Sequence:

GTTCTTTTCACAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGTTAAC

U12 Branch Point Sequence:

GTTCTTTTCACA

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

93.4

1.02

0.7

87.4

21.4

Major BPS

74.5

0.61

1.1

75.6

36.6

Major PPT

84.4

0.77

0.8

79.4

32.6

Minor 5ss

39.3

-1.2

2.9

45.2

Minor BPS

55.9

0.18

1.7

68.82

37.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000026913

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000035615

8834410 - 8851405

16996