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Intron Name: Anas_platyrhynchos_platyrhynchos_9_8890088_8894891_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8890088 - 8894891

Intron Length:

4804

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACT|GTAAGTACT

5'SS Class:

major

3'SS Sequence:

TCTCTCGTTCCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCTTCCT

U12 Branch Point Sequence:

TCCTCCTCTCCT

Flanking Amino Acid:

QFVPDFQSDNLVLHAPPPAK

Intron Amino Acid Position:

152

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.8

0.63

1.1

77.8

36.6

Major BPS

34.6

-0.9

4.2

73.6

41.8

Major PPT

81.2

0.7

0.8

72.6

37.6

Minor 5ss

41.3

-1

2.8

62.9

Minor BPS

39.6

-0.7

3.6

68.05

48.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000010344

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034528

8888752 - 8899519

10768

ENSAPLT00000033414

8888752 - 8900215

11464

ENSAPLT00000010810

8888752 - 8899519

10768