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Intron Name: Anas_platyrhynchos_platyrhynchos_9_8896851_8897443_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8896851 - 8897443

Intron Length:

593

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGGGTGGC

5'SS Class:

strong_major

3'SS Sequence:

TTCTCCCTTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTACCAC

U12 Branch Point Sequence:

GGAGGCTTACCA

Flanking Amino Acid:

QEPRDYCIDSEVPNCQSSYM

Intron Amino Acid Position:

372

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.1

0.71

67.2

38.1

Major BPS

55.7

0.14

1.3

66.8

39.4

Major PPT

86.3

0.82

0.7

80.9

24.2

Minor 5ss

26.2

-2.7

3.2

34.3

Minor BPS

45.3

-0.3

2.1

53.51

44.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000010344

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033414

8888752 - 8900215

11464

ENSAPLT00000010810

8888752 - 8899519

10768