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Intron Name: Anas_platyrhynchos_platyrhynchos_9_8899181_8899297_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8899181 - 8899297

Intron Length:

117

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

AAG|GCAAGTGGC

5'SS Class:

strong_major

3'SS Sequence:

ATTCTGCTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CCCTGAT

U12 Branch Point Sequence:

CGGCCCCTGATG

Flanking Amino Acid:

YYYEKGIMQKVAGERYVYKF

Intron Amino Acid Position:

506

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

1.16

0.7

88.8

25.1

Major BPS

66.4

0.41

1.1

56.9

40.5

Major PPT

80.4

0.68

0.9

73.7

36.3

Minor 5ss

22.7

-3.1

3.9

34.8

41.6

Minor BPS

45.7

-0.4

1.7

45.33

41.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000010344

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033414

8888752 - 8900215

11464

ENSAPLT00000010810

8888752 - 8899519

10768

ENSAPLT00000034528

8888752 - 8899519

10768