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Intron Name: Anas_platyrhynchos_platyrhynchos_9_8917884_8922447_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8917884 - 8922447

Intron Length:

4564

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTAAGAGAG

5'SS Class:

strong_major

3'SS Sequence:

CCCTCTTCCTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTCTGAT

U12 Branch Point Sequence:

TCTCTGATGATC

Flanking Amino Acid:

VTWLKRRGGWADITKCVVNT

Intron Amino Acid Position:

173

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.3

0.71

40.1

Major BPS

0.72

38.9

Major PPT

73.6

0.53

0.7

72.4

25.8

Minor 5ss

29.3

-2.4

3.3

Minor BPS

42.5

-0.6

2.2

55.06

37.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000010535

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010974

8917758 - 8932349

14592