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Intron Name: Anas_platyrhynchos_platyrhynchos_9_8961290_8961795_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8961290 - 8961795

Intron Length:

506

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAT|GTACGTGTG

5'SS Class:

major

3'SS Sequence:

GGTTTCTCTTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GACTGAC

U12 Branch Point Sequence:

AGAGACTGACGT

Flanking Amino Acid:

GEDSSSGDSDMIFSGVGKCL

Intron Amino Acid Position:

306

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.3

0.57

1.1

69.3

41.6

Major BPS

55.9

0.15

1.2

Major PPT

0.61

0.8

74.4

36.5

Minor 5ss

37.7

-1.4

3.5

44.5

Minor BPS

38.2

-0.8

49.93

43.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000010774

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030738

8951397 - 8969922

18526

ENSAPLT00000021655

8951397 - 8968680

17284

ENSAPLT00000011277

8951397 - 8967291

15895