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Intron Name: Anas_platyrhynchos_platyrhynchos_9_8961290_8961943_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8961290 - 8961943

Intron Length:

654

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAT|GTACGTGTG

5'SS Class:

major

3'SS Sequence:

TTTGTGTTTGCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCTTGAC

U12 Branch Point Sequence:

TTTGTCTTGACC

Flanking Amino Acid:

GEDSSSGDSDIDGDTEDGDQ

Intron Amino Acid Position:

306

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.3

0.57

1.1

69.3

41.6

Major BPS

73.9

0.59

65.3

41.6

Major PPT

86.1

0.81

0.8

80.6

Minor 5ss

37.7

-1.4

3.5

44.5

Minor BPS

73.9

0.74

1.3

81.07

33.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000010774

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042012

8951397 - 8975442

24046

ENSAPLT00000040326

8951397 - 8968444

17048