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Intron Name: Anas_platyrhynchos_platyrhynchos_9_8962059_8962348_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8962059 - 8962348

Intron Length:

290

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTCTGTTTG

5'SS Class:

major

3'SS Sequence:

TGTTGCTTTCCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTCAT

U12 Branch Point Sequence:

TGTGCTTGAAAA

Flanking Amino Acid:

KGMALHGSQKPTEPIKRQPR

Intron Amino Acid Position:

363

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.7

0.56

1.3

71.4

41.2

Major BPS

100

1.24

0.5

100

Major PPT

82.5

0.73

0.9

73.4

41.9

Minor 5ss

45.3

-0.5

2.5

58.3

46.3

Minor BPS

54.4

0.14

1.7

66.32

39.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000010774

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030738

8951397 - 8969922

18526

ENSAPLT00000021655

8951397 - 8968680

17284

ENSAPLT00000011277

8951397 - 8967291

15895

ENSAPLT00000042012

8951397 - 8975442

24046

ENSAPLT00000040326

8951397 - 8968444

17048