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Intron Name: Anas_platyrhynchos_platyrhynchos_9_8962421_8964536_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8962421 - 8964536

Intron Length:

2116

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGTATG

5'SS Class:

strong_major

3'SS Sequence:

CTGGCTTTTGCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTAACAT

U12 Branch Point Sequence:

ACTGCCTGACAA

Flanking Amino Acid:

STLVHPVFGELKDKHKQTGG

Intron Amino Acid Position:

387

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

93.2

1.02

0.7

86.9

30.1

Major BPS

58.7

0.22

1.2

Major PPT

78.5

0.64

0.9

72.5

37.6

Minor 5ss

33.9

-1.8

2.8

41.5

45.1

Minor BPS

45.9

-0.3

1.9

55.68

43.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000010774

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040326

8951397 - 8968444

17048

ENSAPLT00000030738

8951397 - 8969922

18526

ENSAPLT00000021655

8951397 - 8968680

17284

ENSAPLT00000011277

8951397 - 8967291

15895

ENSAPLT00000042012

8951397 - 8975442

24046