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Intron Name: Anas_platyrhynchos_platyrhynchos_9_8964674_8968511_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8964674 - 8968511

Intron Length:

3838

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGTGCC

5'SS Class:

strong_major

3'SS Sequence:

TCTTCCCCTACAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTGTAT

U12 Branch Point Sequence:

TTTCTTTGTATT

Flanking Amino Acid:

LIAHMVERVQSIQPCVLPPV

Intron Amino Acid Position:

432

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.8

0.96

0.8

78.4

29.1

Major BPS

71.5

0.53

1.4

71.7

44.6

Major PPT

83.4

0.75

0.7

76.9

25.2

Minor 5ss

28.5

-2.5

35.5

41.2

Minor BPS

49.4

0.04

1.7

73.39

38.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000010774

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030738

8951397 - 8969922

18526

ENSAPLT00000021655

8951397 - 8968680

17284