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Intron Name: Anas_platyrhynchos_platyrhynchos_9_8968559_8969842_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8968559 - 8969842

Intron Length:

1284

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAGGTGTT

5'SS Class:

strong_major

3'SS Sequence:

ATATAACTTACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TAATAAA

U12 Branch Point Sequence:

GTACATATAACT

Flanking Amino Acid:

LPPVTGGSVDGTMVIVTVVV

Intron Amino Acid Position:

448

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.7

0.72

77.9

36.8

Major BPS

70.8

0.52

70.6

31.6

Major PPT

71.5

0.48

42.3

Minor 5ss

37.4

-1.4

3.6

54.1

45.6

Minor BPS

49.5

0.04

1.8

69.67

40.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000010774

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030738

8951397 - 8969922

18526