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Intron Name: Anas_platyrhynchos_platyrhynchos_9_8972702_8973494_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8972702 - 8973494

Intron Length:

793

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGCCAA

5'SS Class:

strong_major

3'SS Sequence:

TTGGCTCTTCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTCTCAC

U12 Branch Point Sequence:

TGTCTCACAGTA

Flanking Amino Acid:

FCLFFYKTHQDDYPLASLPL

Intron Amino Acid Position:

962

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.1

0.8

0.9

70.2

37.7

Major BPS

67.3

0.43

1.2

71.3

36.7

Major PPT

78.8

0.65

0.9

69.7

41.5

Minor 5ss

31.7

-2.1

37.9

46.9

Minor BPS

42.5

-0.5

1.9

54.85

37.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000011291

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027121

8970295 - 9038587

68293

ENSAPLT00000011805

8971295 - 9037830

66536