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Intron Name: Anas_platyrhynchos_platyrhynchos_9_8997912_8999761_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8997912 - 8999761

Intron Length:

1850

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAATGCA

5'SS Class:

strong_major

3'SS Sequence:

CTCTTTTCTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GATTGAT

U12 Branch Point Sequence:

ATGTCTTGGATG

Flanking Amino Acid:

DSGMRKTPYERRHSKVRVST

Intron Amino Acid Position:

371

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.1

0.85

0.9

77.4

30.7

Major BPS

70.8

0.52

1.2

63.4

44.3

Major PPT

88.2

0.86

0.6

24.1

Minor 5ss

32.3

-2

3.2

41.6

Minor BPS

-0

1.5

56.73

39.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000011291

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020501

8974528 - 9038587

64060

ENSAPLT00000011805

8971295 - 9037830

66536

ENSAPLT00000027121

8970295 - 9038587

68293