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Intron Name: Anas_platyrhynchos_platyrhynchos_9_9057178_9057580_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

3UTR

Intron Coordinates:

9057178 - 9057580

Intron Length:

403

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCG|GTAAGGTGT

5'SS Class:

strong_major

3'SS Sequence:

GTCTTGTTTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCTTAAA

U12 Branch Point Sequence:

AGATCTTAAATT

Flanking Amino Acid:

3UTR

Intron Amino Acid Position:

3UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.9

0.73

70.8

41.9

Major BPS

77.8

0.69

78.2

31.8

Major PPT

83.1

0.74

0.9

80.2

37.3

Minor 5ss

38.9

-1.2

3.4

56.3

47.9

Minor BPS

59.1

0.37

1.6

71.73

39.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000011787

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012287

9057051 - 9075315

18265