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Intron Name: Anas_platyrhynchos_platyrhynchos_9_9070668_9073924_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9070668 - 9073924

Intron Length:

3257

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTAAGAAAA

5'SS Class:

strong_major

3'SS Sequence:

AATTGAATCACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TAATCAT

U12 Branch Point Sequence:

TTATGTGTAAAT

Flanking Amino Acid:

KGFEFTLMVVGESGLGKSTL

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.1

0.83

0.9

78.7

29.9

Major BPS

80.4

0.76

80.3

31.8

Major PPT

64.3

0.32

55.5

42.9

Minor 5ss

32.9

-1.9

2.9

37.3

41.2

Minor BPS

47.4

-0.1

2.4

73.64

43.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000011787

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030793

9057581 - 9075477

17897

ENSAPLT00000018275

9058016 - 9075315

17300

ENSAPLT00000012287

9057051 - 9075315

18265