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Intron Name: Anas_platyrhynchos_platyrhynchos_9_9100690_9101967_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9100690 - 9101967

Intron Length:

1278

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAAGAGGG

5'SS Class:

strong_major

3'SS Sequence:

CTTTCTCCCTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGTTCAA

U12 Branch Point Sequence:

TAATGTTCAATT

Flanking Amino Acid:

KYMQKMVADLVENSFSISVP

Intron Amino Acid Position:

577

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.5

0.72

62.5

42.3

Major BPS

75.6

0.64

1.1

77.7

37.1

Major PPT

78.8

0.65

0.7

77.8

24.2

Minor 5ss

-2.3

3.3

35.2

43.3

Minor BPS

50.5

0.09

1.9

70.1

41.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000011984

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047227

9091444 - 9111021

19578

ENSAPLT00000012601

9091444 - 9111657

20214