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Intron Name: Anas_platyrhynchos_platyrhynchos_9_9102351_9103140_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9102351 - 9103140

Intron Length:

790

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAAGTGAA

5'SS Class:

strong_major

3'SS Sequence:

TGTCCTTTCTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TAATTAA

U12 Branch Point Sequence:

GCTTAATTAACA

Flanking Amino Acid:

HRILAIQKELANITEVEVSI

Intron Amino Acid Position:

650

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.5

0.91

0.8

79.4

28.8

Major BPS

67.7

0.44

58.3

38.4

Major PPT

0.63

0.8

76.9

31.7

Minor 5ss

32.1

-2

3.1

36.8

41.9

Minor BPS

0.31

1.8

70.69

40.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000011984

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047227

9091444 - 9111021

19578

ENSAPLT00000012601

9091444 - 9111657

20214