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Intron Name: Anas_platyrhynchos_platyrhynchos_9_9104856_9105540_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9104856 - 9105540

Intron Length:

685

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAAGTCCC

5'SS Class:

strong_major

3'SS Sequence:

TGCTTTCTCACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCACAAT

U12 Branch Point Sequence:

TGCTTTCTCACA

Flanking Amino Acid:

KRIQEIIEDLEAQVTIECTI

Intron Amino Acid Position:

870

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.85

0.9

71.5

38.5

Major BPS

52.6

0.07

1.4

61.3

41.4

Major PPT

81.1

0.7

0.8

75.8

32.9

Minor 5ss

35.6

-1.6

2.9

43.1

37.8

Minor BPS

46.3

-0.2

59.68

40.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000011984

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047227

9091444 - 9111021

19578

ENSAPLT00000012601

9091444 - 9111657

20214