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Intron Name: Anas_platyrhynchos_platyrhynchos_9_9106604_9107235_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9106604 - 9107235

Intron Length:

632

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACGTGAC

5'SS Class:

strong_major

3'SS Sequence:

CCTATCCCTCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTCAA

U12 Branch Point Sequence:

AGTTTTTCAACT

Flanking Amino Acid:

KCEAAKEALQALVPVTIEVE

Intron Amino Acid Position:

968

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.1

0.85

0.9

33.9

Major BPS

90.8

1.01

0.7

91.9

19.6

Major PPT

71.6

0.49

0.8

62.5

34.5

Minor 5ss

31.9

-2.1

3.3

44.6

Minor BPS

65.1

0.55

1.5

79.04

36.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000011984

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047227

9091444 - 9111021

19578

ENSAPLT00000012601

9091444 - 9111657

20214